Identification and full genomic sequence of nerine yellow strip virus

Naomi Beddoe; Alec Forsyth; I. P. Adams; S. McGreig

doi:10.1007/s00705-020-04776-3

Identification and full genomic sequence of nerine yellow strip virus

Naomi Beddoe
, Alec Forsyth
, I. P. Adams
, S. McGreig

Research output: Contribution to journal › Article › peer-review

Abstract

This study reports the first complete genome sequence of nerine yellow stripe virus (NeYSV, GenBank MT396083). The genome consists of 10165 nucleotides, excluding the 3’ terminal poly(A) tail. A single open reading frame encodes a large polyprotein of 3294 amino acids with typical potyvirus features. The nuclear inclusion b and coat protein region shares 95% identity with previously reported NeYSV partial sequence (NC_043153.1). Phylogenetic analysis of polyprotein amino acid sequence showed that NeYSV clustered with hippeastrum mosaic virus (YP_006382256.1).

Original language	English
Journal	Archives of Virology
DOIs	https://doi.org/10.1007/s00705-020-04776-3
Publication status	Published - 4 Sept 2020

Keywords

Genome
Nerine Yellow Stripe Virus
Potyvirus
Virus

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title = "Identification and full genomic sequence of nerine yellow strip virus",

abstract = "This study reports the first complete genome sequence of nerine yellow stripe virus (NeYSV, GenBank MT396083). The genome consists of 10165 nucleotides, excluding the 3{\textquoteright} terminal poly(A) tail. A single open reading frame encodes a large polyprotein of 3294 amino acids with typical potyvirus features. The nuclear inclusion b and coat protein region shares 95\% identity with previously reported NeYSV partial sequence (NC\_043153.1). Phylogenetic analysis of polyprotein amino acid sequence showed that NeYSV clustered with hippeastrum mosaic virus (YP\_006382256.1).",

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author = "Naomi Beddoe and Alec Forsyth and Adams, \{I. P.\} and S. McGreig",

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AU - Beddoe, Naomi

AU - Forsyth, Alec

AU - Adams, I. P.

AU - McGreig, S.

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AB - This study reports the first complete genome sequence of nerine yellow stripe virus (NeYSV, GenBank MT396083). The genome consists of 10165 nucleotides, excluding the 3’ terminal poly(A) tail. A single open reading frame encodes a large polyprotein of 3294 amino acids with typical potyvirus features. The nuclear inclusion b and coat protein region shares 95% identity with previously reported NeYSV partial sequence (NC_043153.1). Phylogenetic analysis of polyprotein amino acid sequence showed that NeYSV clustered with hippeastrum mosaic virus (YP_006382256.1).

KW - Genome

KW - Nerine Yellow Stripe Virus

KW - Potyvirus

KW - Virus

U2 - 10.1007/s00705-020-04776-3

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M3 - Article

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JO - Archives of Virology

JF - Archives of Virology

ER -

Identification and full genomic sequence of nerine yellow strip virus

Abstract

Keywords

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