Identification and full genomic sequence of nerine yellow strip virus

Naomi Beddoe; Alec Forsyth; I. P. Adams; S. McGreig

doi:10.1007/s00705-020-04776-3

Identification and full genomic sequence of nerine yellow strip virus

Naomi Beddoe
, Alec Forsyth
, I. P. Adams
, S. McGreig

Research output: Contribution to journal › Article › peer-review

3 Citations (Scopus)

1 Downloads (Pure)

Abstract

This study reports the first complete genome sequence of nerine yellow stripe virus (NeYSV, GenBank MT396083). The genome consists of 10165 nucleotides, excluding the 3’ terminal poly(A) tail. A single open reading frame encodes a large polyprotein of 3294 amino acids with typical potyvirus features. The nuclear inclusion b and coat protein region shares 95% identity with previously reported NeYSV partial sequence (NC_043153.1). Phylogenetic analysis of polyprotein amino acid sequence showed that NeYSV clustered with hippeastrum mosaic virus (YP_006382256.1).

Original language	English
Journal	Archives of Virology
DOIs	https://doi.org/10.1007/s00705-020-04776-3
Publication status	Published - 4 Sept 2020

Keywords

Genome
Nerine Yellow Stripe Virus
Potyvirus
Virus

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title = "Identification and full genomic sequence of nerine yellow strip virus",

abstract = "This study reports the first complete genome sequence of nerine yellow stripe virus (NeYSV, GenBank MT396083). The genome consists of 10165 nucleotides, excluding the 3{\textquoteright} terminal poly(A) tail. A single open reading frame encodes a large polyprotein of 3294 amino acids with typical potyvirus features. The nuclear inclusion b and coat protein region shares 95\% identity with previously reported NeYSV partial sequence (NC\_043153.1). Phylogenetic analysis of polyprotein amino acid sequence showed that NeYSV clustered with hippeastrum mosaic virus (YP\_006382256.1).",

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T1 - Identification and full genomic sequence of nerine yellow strip virus

AU - Beddoe, Naomi

AU - Forsyth, Alec

AU - Adams, I. P.

AU - McGreig, S.

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Y1 - 2020/9/4

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AB - This study reports the first complete genome sequence of nerine yellow stripe virus (NeYSV, GenBank MT396083). The genome consists of 10165 nucleotides, excluding the 3’ terminal poly(A) tail. A single open reading frame encodes a large polyprotein of 3294 amino acids with typical potyvirus features. The nuclear inclusion b and coat protein region shares 95% identity with previously reported NeYSV partial sequence (NC_043153.1). Phylogenetic analysis of polyprotein amino acid sequence showed that NeYSV clustered with hippeastrum mosaic virus (YP_006382256.1).

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KW - Nerine Yellow Stripe Virus

KW - Potyvirus

KW - Virus

U2 - 10.1007/s00705-020-04776-3

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M3 - Article

SN - 0304-8608

JO - Archives of Virology

JF - Archives of Virology

ER -

Identification and full genomic sequence of nerine yellow strip virus

Abstract

Keywords

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